Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VPS11Q9H270 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 AKR1C7P-201ENST00000305623 895 ntBASIC16.45■□□□□ 0.22
VPS11Q9H270 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS11Q9H270 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.45■□□□□ 0.22
VPS11Q9H270 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS11Q9H270 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VPS11Q9H270 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS11Q9H270 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS11Q9H270 LINC01711-201ENST00000598340 967 ntBASIC16.45■□□□□ 0.22
VPS11Q9H270 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.45■□□□□ 0.22
VPS11Q9H270 GGTLC5P-201ENST00000617623 998 ntBASIC16.45■□□□□ 0.22
VPS11Q9H270 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 AC107918.4-202ENST00000641623 219 ntBASIC16.45■□□□□ 0.22
VPS11Q9H270 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS11Q9H270 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 AC023157.3-201ENST00000619086 2088 ntBASIC16.45■□□□□ 0.22
VPS11Q9H270 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VPS11Q9H270 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS11Q9H270 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS11Q9H270 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS11Q9H270 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
VPS11Q9H270 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS11Q9H270 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VPS11Q9H270 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS11Q9H270 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.44■□□□□ 0.22
VPS11Q9H270 HCG4-201ENST00000418983 998 ntBASIC16.44■□□□□ 0.22
VPS11Q9H270 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.44■□□□□ 0.22
VPS11Q9H270 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VPS11Q9H270 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.44■□□□□ 0.22
VPS11Q9H270 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS11Q9H270 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS11Q9H270 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS11Q9H270 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS11Q9H270 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VPS11Q9H270 AC129492.6-201ENST00000611383 1305 ntBASIC16.44■□□□□ 0.22
VPS11Q9H270 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS11Q9H270 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VPS11Q9H270 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS11Q9H270 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VPS11Q9H270 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS11Q9H270 SAPCD2P3-201ENST00000455031 850 ntBASIC16.43■□□□□ 0.22
VPS11Q9H270 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS11Q9H270 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS11Q9H270 AF238378.1-201ENST00000526806 358 ntBASIC16.43■□□□□ 0.22
VPS11Q9H270 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
VPS11Q9H270 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms