Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VRK1Q99986 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.48□□□□□ -0.09
VRK1Q99986 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VRK1Q99986 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
VRK1Q99986 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VRK1Q99986 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VRK1Q99986 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VRK1Q99986 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
VRK1Q99986 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.48□□□□□ -0.09
VRK1Q99986 AC091812.2-201ENST00000619081 385 ntBASIC14.48□□□□□ -0.09
VRK1Q99986 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK1Q99986 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
VRK1Q99986 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK1Q99986 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.48□□□□□ -0.09
VRK1Q99986 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
VRK1Q99986 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK1Q99986 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
VRK1Q99986 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK1Q99986 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VRK1Q99986 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK1Q99986 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VRK1Q99986 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.47□□□□□ -0.09
VRK1Q99986 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 AP006288.1-201ENST00000446065 395 ntBASIC14.47□□□□□ -0.09
VRK1Q99986 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.47□□□□□ -0.09
VRK1Q99986 YBX1P5-201ENST00000509441 847 ntBASIC14.47□□□□□ -0.09
VRK1Q99986 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 ACTL9-202ENST00000612068 1252 ntBASIC14.47□□□□□ -0.09
VRK1Q99986 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK1Q99986 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
VRK1Q99986 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK1Q99986 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK1Q99986 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VRK1Q99986 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VRK1Q99986 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VRK1Q99986 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
VRK1Q99986 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.46□□□□□ -0.09
VRK1Q99986 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK1Q99986 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VRK1Q99986 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.46□□□□□ -0.09
VRK1Q99986 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.46□□□□□ -0.09
VRK1Q99986 AC254562.1-201ENST00000417586 456 ntBASIC14.46□□□□□ -0.09
VRK1Q99986 PMS2P2-201ENST00000425039 1128 ntBASIC14.46□□□□□ -0.09
VRK1Q99986 CNN2P11-201ENST00000429351 262 ntBASIC14.46□□□□□ -0.09
VRK1Q99986 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK1Q99986 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.46□□□□□ -0.09
VRK1Q99986 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.46□□□□□ -0.09
VRK1Q99986 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms