Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC26.35■■□□□ 1.81
IFT140Q96RY7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
IFT140Q96RY7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
IFT140Q96RY7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
IFT140Q96RY7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT140Q96RY7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT140Q96RY7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT140Q96RY7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT140Q96RY7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT140Q96RY7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
IFT140Q96RY7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
IFT140Q96RY7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC26.34■■□□□ 1.81
IFT140Q96RY7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC26.33■■□□□ 1.81
IFT140Q96RY7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC26.33■■□□□ 1.81
IFT140Q96RY7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC26.33■■□□□ 1.81
IFT140Q96RY7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC26.33■■□□□ 1.81
IFT140Q96RY7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC26.33■■□□□ 1.81
IFT140Q96RY7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC26.33■■□□□ 1.81
IFT140Q96RY7 MIR4750-201ENST00000584564 56 ntBASIC26.33■■□□□ 1.81
IFT140Q96RY7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFT140Q96RY7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC26.33■■□□□ 1.81
IFT140Q96RY7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
IFT140Q96RY7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
IFT140Q96RY7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFT140Q96RY7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFT140Q96RY7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFT140Q96RY7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 AC114501.1-201ENST00000445949 172 ntBASIC26.32■■□□□ 1.8
IFT140Q96RY7 RN7SL11P-201ENST00000471305 293 ntBASIC26.32■■□□□ 1.8
IFT140Q96RY7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 AC097359.3-201ENST00000603982 1210 ntBASIC26.32■■□□□ 1.8
IFT140Q96RY7 AL354989.2-201ENST00000435838 1540 ntBASIC26.32■■□□□ 1.8
IFT140Q96RY7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFT140Q96RY7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
IFT140Q96RY7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC26.32■■□□□ 1.8
IFT140Q96RY7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
IFT140Q96RY7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 AC008132.1-202ENST00000342005 1389 ntBASIC26.31■■□□□ 1.8
IFT140Q96RY7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
IFT140Q96RY7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC26.31■■□□□ 1.8
IFT140Q96RY7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC26.31■■□□□ 1.8
IFT140Q96RY7 AC024681.1-201ENST00000521917 487 ntBASIC26.31■■□□□ 1.8
IFT140Q96RY7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC26.31■■□□□ 1.8
IFT140Q96RY7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC26.31■■□□□ 1.8
IFT140Q96RY7 AC007663.3-201ENST00000609632 465 ntBASIC26.31■■□□□ 1.8
IFT140Q96RY7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC26.31■■□□□ 1.8
IFT140Q96RY7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 AC006480.2-201ENST00000609770 1337 ntBASIC26.31■■□□□ 1.8
IFT140Q96RY7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
IFT140Q96RY7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IFT140Q96RY7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC26.3■■□□□ 1.8
IFT140Q96RY7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 RN7SL48P-201ENST00000579283 293 ntBASIC26.3■■□□□ 1.8
IFT140Q96RY7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC26.3■■□□□ 1.8
IFT140Q96RY7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC26.3■■□□□ 1.8
IFT140Q96RY7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC26.3■■□□□ 1.8
IFT140Q96RY7 AL592424.1-201ENST00000563624 1536 ntBASIC26.3■■□□□ 1.8
IFT140Q96RY7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC26.3■■□□□ 1.8
IFT140Q96RY7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
IFT140Q96RY7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
IFT140Q96RY7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms