Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 PGM5P2-202ENST00000637225 1043 ntBASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 CICP14-201ENST00000629111 2732 ntBASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IPQ96QF0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AC005912.2-201ENST00000619492 2400 ntBASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AP002414.1-201ENST00000391405 1147 ntBASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 AL353692.3-201ENST00000407031 1396 ntBASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IPQ96QF0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB3IPQ96QF0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RAB3IPQ96QF0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB3IPQ96QF0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB3IPQ96QF0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 SNX33P1-201ENST00000592116 1762 ntBASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 AC087386.2-201ENST00000623212 4637 ntBASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IPQ96QF0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms