Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 AC008677.1-201ENST00000519230 1561 ntBASIC19.27■□□□□ 0.68
NEK1Q96PY6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 ELL2P1-201ENST00000413990 1906 ntBASIC19.27■□□□□ 0.68
NEK1Q96PY6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 MIR346-201ENST00000362234 95 ntBASIC19.27■□□□□ 0.68
NEK1Q96PY6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 DNAJB3-201ENST00000446806 729 ntBASIC19.27■□□□□ 0.68
NEK1Q96PY6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 TIMM8BP1-201ENST00000452384 211 ntBASIC19.27■□□□□ 0.68
NEK1Q96PY6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.27■□□□□ 0.68
NEK1Q96PY6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEK1Q96PY6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
NEK1Q96PY6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NEK1Q96PY6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NEK1Q96PY6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.27■□□□□ 0.67
NEK1Q96PY6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 HAUS4P1-201ENST00000406739 1145 ntBASIC19.26■□□□□ 0.67
NEK1Q96PY6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 GPX1P2-201ENST00000429271 606 ntBASIC19.26■□□□□ 0.67
NEK1Q96PY6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NEK1Q96PY6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEK1Q96PY6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 CEND1P1-201ENST00000451006 455 ntBASIC19.25■□□□□ 0.67
NEK1Q96PY6 AC245100.5-201ENST00000452108 331 ntBASIC19.25■□□□□ 0.67
NEK1Q96PY6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 AP000842.3-202ENST00000569238 1080 ntBASIC19.25■□□□□ 0.67
NEK1Q96PY6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NEK1Q96PY6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEK1Q96PY6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms