Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 SNX29P1-201ENST00000548357 1007 ntBASIC17.2■□□□□ 0.34
CASD1Q96PB1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 AC015936.2-201ENST00000593177 259 ntBASIC17.2■□□□□ 0.34
CASD1Q96PB1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 REXO1L8P-201ENST00000604378 1897 ntBASIC17.2■□□□□ 0.34
CASD1Q96PB1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASD1Q96PB1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CASD1Q96PB1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 CROCCP4-201ENST00000457096 498 ntBASIC17.19■□□□□ 0.34
CASD1Q96PB1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 MIR6775-201ENST00000617557 69 ntBASIC17.19■□□□□ 0.34
CASD1Q96PB1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.19■□□□□ 0.34
CASD1Q96PB1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CASD1Q96PB1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASD1Q96PB1 AC234783.1-201ENST00000441761 496 ntBASIC17.18■□□□□ 0.34
CASD1Q96PB1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 USP32P1-208ENST00000506594 1164 ntBASIC17.18■□□□□ 0.34
CASD1Q96PB1 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.18■□□□□ 0.34
CASD1Q96PB1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 AC036164.1-201ENST00000570544 333 ntBASIC17.18■□□□□ 0.34
CASD1Q96PB1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.18■□□□□ 0.34
CASD1Q96PB1 BTNL10-201ENST00000595971 695 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms