Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 FAM220BP-201ENST00000377689 816 ntBASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 MIR940-201ENST00000401276 94 ntBASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDLIM5Q96HC4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 YBX2P1-201ENST00000394192 760 ntBASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDLIM5Q96HC4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms