Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AC002056.1-201ENST00000395613 760 ntBASIC14.31□□□□□ -0.12
SPTSSAQ969W0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 FDX1P1-201ENST00000449115 551 ntBASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AC074386.1-202ENST00000463561 864 ntBASIC14.31□□□□□ -0.12
SPTSSAQ969W0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AC068137.2-201ENST00000605408 478 ntBASIC14.31□□□□□ -0.12
SPTSSAQ969W0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 BX640515.1-201ENST00000617215 977 ntBASIC14.31□□□□□ -0.12
SPTSSAQ969W0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSAQ969W0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC092919.2-201ENST00000623631 1645 ntBASIC14.3□□□□□ -0.12
SPTSSAQ969W0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 MED15P5-201ENST00000423150 992 ntBASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PDPK2P-202ENST00000562415 1191 ntBASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC027601.4-201ENST00000611259 610 ntBASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC120114.3-201ENST00000611923 658 ntBASIC14.3□□□□□ -0.12
SPTSSAQ969W0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 LINC02199-201ENST00000506655 2702 ntBASIC14.3□□□□□ -0.12
SPTSSAQ969W0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms