Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SEMA4DQ92854 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SEMA4DQ92854 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 FAM220BP-201ENST00000377689 816 ntBASIC17.49■□□□□ 0.39
SEMA4DQ92854 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 AP000344.2-201ENST00000512987 629 ntBASIC17.49■□□□□ 0.39
SEMA4DQ92854 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SEMA4DQ92854 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SEMA4DQ92854 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 AP006288.1-201ENST00000446065 395 ntBASIC17.48■□□□□ 0.39
SEMA4DQ92854 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 RNA5SP410-201ENST00000516285 106 ntBASIC17.48■□□□□ 0.39
SEMA4DQ92854 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SEMA4DQ92854 OR6D1P-203ENST00000641209 4860 ntBASIC17.48■□□□□ 0.39
SEMA4DQ92854 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SEMA4DQ92854 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SEMA4DQ92854 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.47■□□□□ 0.39
SEMA4DQ92854 AC004967.1-201ENST00000453589 447 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms