Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX1Q92499 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX1Q92499 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX1Q92499 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX1Q92499 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DDX1Q92499 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX1Q92499 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DDX1Q92499 AP005117.1-202ENST00000581724 1908 ntBASIC17.31■□□□□ 0.36
DDX1Q92499 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
DDX1Q92499 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DDX1Q92499 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DDX1Q92499 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX1Q92499 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 AL139400.1-201ENST00000366220 510 ntBASIC17.31■□□□□ 0.36
DDX1Q92499 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX1Q92499 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 AC142381.1-201ENST00000426099 345 ntBASIC17.31■□□□□ 0.36
DDX1Q92499 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX1Q92499 AC245100.5-201ENST00000452108 331 ntBASIC17.31■□□□□ 0.36
DDX1Q92499 AC067863.1-201ENST00000494933 530 ntBASIC17.31■□□□□ 0.36
DDX1Q92499 KRT8P48-201ENST00000515599 1220 ntBASIC17.31■□□□□ 0.36
DDX1Q92499 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.31■□□□□ 0.36
DDX1Q92499 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX1Q92499 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.31■□□□□ 0.36
DDX1Q92499 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.31■□□□□ 0.36
DDX1Q92499 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 AC008267.7-201ENST00000624570 1194 ntBASIC17.31■□□□□ 0.36
DDX1Q92499 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX1Q92499 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX1Q92499 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX1Q92499 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DDX1Q92499 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX1Q92499 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DDX1Q92499 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
DDX1Q92499 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
DDX1Q92499 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX1Q92499 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DDX1Q92499 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX1Q92499 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.3■□□□□ 0.36
DDX1Q92499 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.3■□□□□ 0.36
DDX1Q92499 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX1Q92499 AC105233.2-201ENST00000523697 349 ntBASIC17.3■□□□□ 0.36
DDX1Q92499 AF228730.5-201ENST00000530288 346 ntBASIC17.3■□□□□ 0.36
DDX1Q92499 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DDX1Q92499 AC027307.2-201ENST00000591252 911 ntBASIC17.3■□□□□ 0.36
DDX1Q92499 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
DDX1Q92499 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DDX1Q92499 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX1Q92499 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DDX1Q92499 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DDX1Q92499 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DDX1Q92499 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.3■□□□□ 0.36
DDX1Q92499 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX1Q92499 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX1Q92499 AC105917.1-201ENST00000506637 2539 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DDX1Q92499 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 MIR346-201ENST00000362234 95 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 SPCS2P4-201ENST00000436160 681 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 AC098859.1-201ENST00000502915 1238 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 TERF1P3-201ENST00000505638 1227 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms