Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 AC026691.1-201ENST00000602502 2017 ntBASIC15.97■□□□□ 0.15
ATL1Q8WXF7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATL1Q8WXF7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.96■□□□□ 0.15
ATL1Q8WXF7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 AC023274.1-201ENST00000418278 595 ntBASIC15.96■□□□□ 0.15
ATL1Q8WXF7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.96■□□□□ 0.15
ATL1Q8WXF7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATL1Q8WXF7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.96■□□□□ 0.14
ATL1Q8WXF7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATL1Q8WXF7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATL1Q8WXF7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 PMS2P7-201ENST00000506558 1336 ntBASIC15.95■□□□□ 0.14
ATL1Q8WXF7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 AL136379.1-201ENST00000623471 2642 ntBASIC15.95■□□□□ 0.14
ATL1Q8WXF7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 MCCD1P2-201ENST00000423228 335 ntBASIC15.95■□□□□ 0.14
ATL1Q8WXF7 AC004832.2-201ENST00000426397 482 ntBASIC15.95■□□□□ 0.14
ATL1Q8WXF7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ATL1Q8WXF7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms