Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 AL139400.1-201ENST00000366220 510 ntBASIC17.25■□□□□ 0.35
UBA3Q8TBC4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 RNA5SP410-201ENST00000516285 106 ntBASIC17.25■□□□□ 0.35
UBA3Q8TBC4 ALG1L8P-201ENST00000533887 760 ntBASIC17.25■□□□□ 0.35
UBA3Q8TBC4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 AC009093.7-201ENST00000623853 1223 ntBASIC17.25■□□□□ 0.35
UBA3Q8TBC4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBA3Q8TBC4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 MTHFR-217ENST00000641820 1569 ntBASIC17.24■□□□□ 0.35
UBA3Q8TBC4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBA3Q8TBC4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 AC109322.1-201ENST00000524499 1264 ntBASIC17.23■□□□□ 0.35
UBA3Q8TBC4 AC026150.2-201ENST00000564693 1156 ntBASIC17.23■□□□□ 0.35
UBA3Q8TBC4 RARRES2P9-201ENST00000565168 469 ntBASIC17.23■□□□□ 0.35
UBA3Q8TBC4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBA3Q8TBC4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms