Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 TSPY26P-202ENST00000565928 3884 ntBASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 BCRP1-201ENST00000444246 691 ntBASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 SLC25A39P2-201ENST00000537614 270 ntBASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 AC124947.2-201ENST00000547118 1133 ntBASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 AL096865.1-201ENST00000606796 927 ntBASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 AC021097.1-201ENST00000607902 574 ntBASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 RNF216P1-203ENST00000404404 2427 ntBASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.19
CLDND2Q8NHS1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLDND2Q8NHS1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLDND2Q8NHS1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CLDND2Q8NHS1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CLDND2Q8NHS1 TUBB3P1-201ENST00000405796 1332 ntBASIC13.9□□□□□ -0.19
CLDND2Q8NHS1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLDND2Q8NHS1 PAUPAR-201ENST00000630360 2965 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AC078925.2-201ENST00000624013 1973 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AC026150.2-201ENST00000564693 1156 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AP000842.3-202ENST00000569238 1080 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AC084121.4-201ENST00000641598 221 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AF228730.8-201ENST00000642140 221 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms