Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MIR3907-201ENST00000579424 151 ntBASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 AC097359.3-201ENST00000603982 1210 ntBASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 AP005019.2-201ENST00000615104 511 ntBASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 AC132938.4-201ENST00000623835 848 ntBASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 AL603756.1-201ENST00000606511 2163 ntBASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.23■□□□□ 0.99
COL22A1Q8NFW1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 NKAIN1P1-201ENST00000435754 582 ntBASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 PRKXP1-201ENST00000561423 1122 ntBASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AL354989.2-201ENST00000435838 1540 ntBASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 RN7SL555P-201ENST00000584742 339 ntBASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 AL645939.5-201ENST00000606834 243 ntBASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL22A1Q8NFW1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 AC008132.1-202ENST00000342005 1389 ntBASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 AL133267.1-201ENST00000398220 340 ntBASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 AC026740.1-201ENST00000607068 791 ntBASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 CU633904.3-201ENST00000624042 1029 ntBASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL22A1Q8NFW1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
COL22A1Q8NFW1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
COL22A1Q8NFW1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
COL22A1Q8NFW1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 PARVG-202ENST00000415224 999 ntTSL 2 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 AC067852.2-201ENST00000590513 2313 ntBASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL22A1Q8NFW1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.19■□□□□ 0.98
COL22A1Q8NFW1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms