Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SRFBP1Q8NEF9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SRFBP1Q8NEF9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SRFBP1Q8NEF9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SRFBP1Q8NEF9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SRFBP1Q8NEF9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SRFBP1Q8NEF9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 CEND1P1-201ENST00000451006 455 ntBASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AC098859.1-201ENST00000502915 1238 ntBASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AC027307.2-201ENST00000591252 911 ntBASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AC092364.2-201ENST00000596710 2692 ntBASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 AL662844.4-201ENST00000606367 2838 ntBASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.58■□□□□ 0.08
SRFBP1Q8NEF9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 UPF3AP3-201ENST00000420996 769 ntBASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AC245100.5-201ENST00000452108 331 ntBASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 YBX1P5-201ENST00000509441 847 ntBASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AC243562.1-201ENST00000560672 389 ntBASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AC024267.1-201ENST00000582320 895 ntBASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AL589702.1-201ENST00000641229 1509 ntBASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AC103702.1-201ENST00000548801 2630 ntBASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SRFBP1Q8NEF9 AL596087.1-201ENST00000400979 1969 ntBASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 AL513523.2-202ENST00000427283 2040 ntBASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SRFBP1Q8NEF9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms