Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 C8orf49-201ENST00000525043 1968 ntBASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 AL513523.2-202ENST00000427283 2040 ntBASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIMC1Q8NDZ2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
SIMC1Q8NDZ2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 AL138918.1-201ENST00000568306 659 ntBASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.39■□□□□ 0.05
SIMC1Q8NDZ2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms