Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 ADH5P3-201ENST00000433842 1137 ntBASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 AL078644.1-201ENST00000609881 752 ntBASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 ELL2P1-201ENST00000413990 1906 ntBASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 ACTG1P14-201ENST00000446382 1122 ntBASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 AC055717.3-201ENST00000622967 595 ntBASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 GPAA1P2-202ENST00000606848 1787 ntBASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
C11orf42Q8N5U0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms