Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 MIR346-201ENST00000362234 95 ntBASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 GPALPP1-207ENST00000611650 899 ntBASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 AC139530.3-201ENST00000620344 690 ntBASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 AL592424.1-201ENST00000563624 1536 ntBASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB42Q8N4Z0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 RNA5SP410-201ENST00000516285 106 ntBASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 LINC01225-203ENST00000563550 1244 ntBASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AC084121.4-201ENST00000641598 221 ntBASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AF228730.8-201ENST00000642140 221 ntBASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 AC084018.2-201ENST00000613093 2607 ntBASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB42Q8N4Z0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAB42Q8N4Z0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms