Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBR1Q8IWV7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 AL662890.1-201ENST00000396818 632 ntBASIC22.63■■□□□ 1.21
UBR1Q8IWV7 KRTAP10-13P-201ENST00000412914 571 ntBASIC22.63■■□□□ 1.21
UBR1Q8IWV7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 MIR4722-201ENST00000578292 60 ntBASIC22.63■■□□□ 1.21
UBR1Q8IWV7 AL450472.2-201ENST00000603663 1156 ntBASIC22.63■■□□□ 1.21
UBR1Q8IWV7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.63■■□□□ 1.21
UBR1Q8IWV7 ACKR1-201ENST00000368121 1240 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 TMEM198B-204ENST00000484016 896 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 IMP3P2-201ENST00000489760 475 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AC145423.3-201ENST00000615987 467 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 NOC2LP2-201ENST00000407594 1944 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AP001282.1-201ENST00000531301 1499 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 NDUFV2P1-201ENST00000596415 907 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 ECM1P1-201ENST00000604092 1279 ntBASIC22.62■■□□□ 1.21
UBR1Q8IWV7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC22.62■■□□□ 1.21
UBR1Q8IWV7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 AL133267.1-201ENST00000398220 340 ntBASIC22.61■■□□□ 1.21
UBR1Q8IWV7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 AL451050.2-201ENST00000606967 682 ntBASIC22.61■■□□□ 1.21
UBR1Q8IWV7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 AC006453.4-201ENST00000636949 1252 ntBASIC22.61■■□□□ 1.21
UBR1Q8IWV7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
UBR1Q8IWV7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms