Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AP003733.1-201ENST00000491725 852 ntBASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 STK25P1-201ENST00000585406 838 ntBASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 AL135999.2-201ENST00000622438 1686 ntBASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CROCCP3Q8IVE0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 MBLAC2-202ENST00000514906 1936 ntBASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ST20-AS1-201ENST00000560255 4223 ntBASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 AL139011.1-202ENST00000642063 584 ntBASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CROCCP3Q8IVE0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms