Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRRC28Q86X40 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRC28Q86X40 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRRC28Q86X40 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRRC28Q86X40 AC148477.5-201ENST00000625164 1645 ntBASIC14.59□□□□□ -0.07
LRRC28Q86X40 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LRRC28Q86X40 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
LRRC28Q86X40 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRC28Q86X40 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRC28Q86X40 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LRRC28Q86X40 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRC28Q86X40 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.58□□□□□ -0.07
LRRC28Q86X40 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LRRC28Q86X40 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRRC28Q86X40 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC006557.2-201ENST00000592985 1240 ntBASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 MIR7706-201ENST00000613747 67 ntBASIC14.58□□□□□ -0.08
LRRC28Q86X40 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 AC243591.1-201ENST00000452967 1364 ntBASIC14.58□□□□□ -0.08
LRRC28Q86X40 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRC28Q86X40 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LRRC28Q86X40 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AC097637.2-201ENST00000624096 1997 ntBASIC14.57□□□□□ -0.08
LRRC28Q86X40 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AC012640.2-201ENST00000561606 901 ntBASIC14.57□□□□□ -0.08
LRRC28Q86X40 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AC013467.2-201ENST00000605472 835 ntBASIC14.57□□□□□ -0.08
LRRC28Q86X40 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 AC120114.3-201ENST00000611923 658 ntBASIC14.57□□□□□ -0.08
LRRC28Q86X40 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRC28Q86X40 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRC28Q86X40 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRRC28Q86X40 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRC28Q86X40 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms