Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.21□□□□□ -0.14
LRRTM1Q86UE6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 ELK2BP-201ENST00000415014 1224 ntBASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 MTDHP3-201ENST00000594186 672 ntBASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 MTDHP4-201ENST00000600287 670 ntBASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 TMBIM7P-203ENST00000641617 1718 ntBASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LRRTM1Q86UE6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 SART3-203ENST00000546611 1184 ntBASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 AC092119.3-201ENST00000612618 583 ntBASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRTM1Q86UE6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AL109954.1-202ENST00000564051 2148 ntBASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AC129492.6-201ENST00000611383 1305 ntBASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms