Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 SLC7A15P-201ENST00000424028 1363 ntBASIC20.43■□□□□ 0.86
COPS6Q7L5N1 AL391825.1-201ENST00000457671 1364 ntBASIC20.43■□□□□ 0.86
COPS6Q7L5N1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.43■□□□□ 0.86
COPS6Q7L5N1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.42■□□□□ 0.86
COPS6Q7L5N1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AC087499.6-201ENST00000411576 835 ntBASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AC245100.5-201ENST00000452108 331 ntBASIC20.41■□□□□ 0.86
COPS6Q7L5N1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 TPRX2P-201ENST00000535362 881 ntBASIC20.41■□□□□ 0.86
COPS6Q7L5N1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AC008494.3-201ENST00000606615 944 ntBASIC20.41■□□□□ 0.86
COPS6Q7L5N1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COPS6Q7L5N1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 AZGP1P1-201ENST00000411909 902 ntBASIC20.4■□□□□ 0.86
COPS6Q7L5N1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COPS6Q7L5N1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms