Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 SDHAP3-202ENST00000515467 728 ntBASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 RN7SL275P-201ENST00000582762 335 ntBASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNFT1Q5M7Z0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 CYP4F24P-201ENST00000586049 1580 ntBASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 MEIS3P1-201ENST00000495167 958 ntBASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 AL365330.1-201ENST00000607459 531 ntBASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 MIR6069-201ENST00000620069 79 ntBASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNFT1Q5M7Z0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 CU639417.3-201ENST00000624240 1404 ntBASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.59□□□□□ -0.07
RNFT1Q5M7Z0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms