Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 PAWRP1-201ENST00000451083 565 ntBASIC14.66□□□□□ -0.06
CCDC58Q4VC31 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 TOB2P1-201ENST00000469761 992 ntBASIC14.66□□□□□ -0.06
CCDC58Q4VC31 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 AC092329.2-201ENST00000598402 547 ntBASIC14.66□□□□□ -0.06
CCDC58Q4VC31 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 AC005332.1-201ENST00000577698 1310 ntBASIC14.66□□□□□ -0.06
CCDC58Q4VC31 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC58Q4VC31 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 AC007191.1-201ENST00000623179 2995 ntBASIC14.65□□□□□ -0.06
CCDC58Q4VC31 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 CDC14C-201ENST00000428251 1719 ntBASIC14.65□□□□□ -0.06
CCDC58Q4VC31 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 AL359183.1-201ENST00000623796 2132 ntBASIC14.65□□□□□ -0.06
CCDC58Q4VC31 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC58Q4VC31 AC067930.6-201ENST00000623257 4947 ntBASIC14.65□□□□□ -0.07
CCDC58Q4VC31 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.07
CCDC58Q4VC31 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.64□□□□□ -0.07
CCDC58Q4VC31 AC112504.1-201ENST00000623415 1841 ntBASIC14.64□□□□□ -0.07
CCDC58Q4VC31 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC58Q4VC31 AC131009.4-201ENST00000624048 1740 ntBASIC14.64□□□□□ -0.07
CCDC58Q4VC31 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms