Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.37■□□□□ 0.21
AP1S1P61966 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.37■□□□□ 0.21
AP1S1P61966 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
AP1S1P61966 AL662844.4-201ENST00000606367 2838 ntBASIC16.37■□□□□ 0.21
AP1S1P61966 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP1S1P61966 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S1P61966 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
AP1S1P61966 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S1P61966 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S1P61966 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S1P61966 AL596087.1-201ENST00000400979 1969 ntBASIC16.37■□□□□ 0.21
AP1S1P61966 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP1S1P61966 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S1P61966 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S1P61966 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S1P61966 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S1P61966 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
AP1S1P61966 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
AP1S1P61966 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP1S1P61966 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
AP1S1P61966 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S1P61966 AC107890.1-201ENST00000422478 521 ntBASIC16.36■□□□□ 0.21
AP1S1P61966 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S1P61966 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S1P61966 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.36■□□□□ 0.21
AP1S1P61966 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.36■□□□□ 0.21
AP1S1P61966 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S1P61966 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.36■□□□□ 0.21
AP1S1P61966 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S1P61966 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S1P61966 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S1P61966 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.36■□□□□ 0.21
AP1S1P61966 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S1P61966 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S1P61966 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S1P61966 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S1P61966 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S1P61966 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.35■□□□□ 0.21
AP1S1P61966 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S1P61966 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S1P61966 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S1P61966 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S1P61966 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.35■□□□□ 0.21
AP1S1P61966 HAUS4P1-201ENST00000406739 1145 ntBASIC16.35■□□□□ 0.21
AP1S1P61966 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 RFPL4AP1-201ENST00000530883 850 ntBASIC16.35■□□□□ 0.21
AP1S1P61966 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.35■□□□□ 0.21
AP1S1P61966 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.35■□□□□ 0.21
AP1S1P61966 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.35■□□□□ 0.21
AP1S1P61966 BANF1P1-201ENST00000553684 263 ntBASIC16.35■□□□□ 0.21
AP1S1P61966 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S1P61966 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S1P61966 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S1P61966 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms