Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.97□□□□□ -0.01
CDC42P60953 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC42P60953 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.97□□□□□ -0.01
CDC42P60953 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
CDC42P60953 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.97□□□□□ -0.01
CDC42P60953 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 REXO1L3P-201ENST00000622202 1288 ntBASIC14.97□□□□□ -0.01
CDC42P60953 LINC02228-204ENST00000642115 2962 ntBASIC14.97□□□□□ -0.01
CDC42P60953 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.97□□□□□ -0.01
CDC42P60953 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC42P60953 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC42P60953 AL592424.1-201ENST00000563624 1536 ntBASIC14.97□□□□□ -0.01
CDC42P60953 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC42P60953 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC42P60953 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDC42P60953 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC42P60953 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC42P60953 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CDC42P60953 RCN1P1-201ENST00000400413 996 ntBASIC14.96□□□□□ -0.01
CDC42P60953 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
CDC42P60953 IGHV3-47-201ENST00000425060 335 ntBASIC14.96□□□□□ -0.01
CDC42P60953 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 TOB2P1-201ENST00000469761 992 ntBASIC14.96□□□□□ -0.01
CDC42P60953 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.96□□□□□ -0.01
CDC42P60953 DUX4L26-201ENST00000489078 1255 ntBASIC14.96□□□□□ -0.01
CDC42P60953 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CDC42P60953 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC42P60953 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CDC42P60953 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.96□□□□□ -0.01
CDC42P60953 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 TMBIM7P-203ENST00000641617 1718 ntBASIC14.96□□□□□ -0.01
CDC42P60953 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CDC42P60953 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC42P60953 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42P60953 AP003680.1-201ENST00000598970 3660 ntBASIC14.96□□□□□ -0.02
CDC42P60953 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
CDC42P60953 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC42P60953 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.96□□□□□ -0.02
CDC42P60953 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CDC42P60953 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42P60953 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42P60953 AL353732.1-201ENST00000569618 1459 ntBASIC14.95□□□□□ -0.02
CDC42P60953 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42P60953 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC42P60953 AC020658.6-201ENST00000623564 1870 ntBASIC14.95□□□□□ -0.02
CDC42P60953 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDC42P60953 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDC42P60953 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42P60953 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDC42P60953 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms