Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RAB38P57729 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 HAUS4P1-201ENST00000406739 1145 ntBASIC15.29■□□□□ 0.04
RAB38P57729 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB38P57729 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB38P57729 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 AC092183.1-201ENST00000469884 875 ntBASIC15.29■□□□□ 0.04
RAB38P57729 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RAB38P57729 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.29■□□□□ 0.04
RAB38P57729 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 AC003101.2-201ENST00000612557 442 ntBASIC15.29■□□□□ 0.04
RAB38P57729 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB38P57729 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.29■□□□□ 0.04
RAB38P57729 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB38P57729 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB38P57729 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB38P57729 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB38P57729 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RAB38P57729 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.28■□□□□ 0.04
RAB38P57729 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB38P57729 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB38P57729 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB38P57729 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB38P57729 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB38P57729 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB38P57729 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB38P57729 AC026979.3-201ENST00000607315 403 ntBASIC15.28■□□□□ 0.04
RAB38P57729 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 AC093028.1-201ENST00000622998 982 ntBASIC15.28■□□□□ 0.04
RAB38P57729 Z92544.3-201ENST00000624747 417 ntBASIC15.28■□□□□ 0.04
RAB38P57729 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB38P57729 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB38P57729 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB38P57729 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RAB38P57729 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB38P57729 PCDH8P1-201ENST00000428983 2773 ntBASIC15.28■□□□□ 0.04
RAB38P57729 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB38P57729 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB38P57729 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms