Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ACTL9-202ENST00000612068 1252 ntBASIC16.46■□□□□ 0.23
LIMK2P53671 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LIMK2P53671 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK2P53671 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.46■□□□□ 0.23
LIMK2P53671 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.46■□□□□ 0.23
LIMK2P53671 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.46■□□□□ 0.22
LIMK2P53671 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LIMK2P53671 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LIMK2P53671 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LIMK2P53671 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.45■□□□□ 0.22
LIMK2P53671 AC112504.1-201ENST00000623415 1841 ntBASIC16.45■□□□□ 0.22
LIMK2P53671 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LIMK2P53671 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LIMK2P53671 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.45■□□□□ 0.22
LIMK2P53671 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.45■□□□□ 0.22
LIMK2P53671 AP000344.2-201ENST00000512987 629 ntBASIC16.45■□□□□ 0.22
LIMK2P53671 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.45■□□□□ 0.22
LIMK2P53671 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LIMK2P53671 AP002472.1-201ENST00000577490 586 ntBASIC16.45■□□□□ 0.22
LIMK2P53671 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.45■□□□□ 0.22
LIMK2P53671 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.45■□□□□ 0.22
LIMK2P53671 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.45■□□□□ 0.22
LIMK2P53671 AP005117.1-202ENST00000581724 1908 ntBASIC16.45■□□□□ 0.22
LIMK2P53671 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LIMK2P53671 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LIMK2P53671 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
LIMK2P53671 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 AL592424.1-201ENST00000563624 1536 ntBASIC16.45■□□□□ 0.22
LIMK2P53671 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
LIMK2P53671 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LIMK2P53671 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
LIMK2P53671 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 MIR648-201ENST00000385046 94 ntBASIC16.44■□□□□ 0.22
LIMK2P53671 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.44■□□□□ 0.22
LIMK2P53671 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 AC092902.6-201ENST00000641783 218 ntBASIC16.44■□□□□ 0.22
LIMK2P53671 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 AC069224.1-201ENST00000566372 1715 ntBASIC16.44■□□□□ 0.22
LIMK2P53671 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LIMK2P53671 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LIMK2P53671 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms