Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.49□□□□□ -0.09
LHX2P50458 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.49□□□□□ -0.09
LHX2P50458 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.49□□□□□ -0.09
LHX2P50458 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.49□□□□□ -0.09
LHX2P50458 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 CYP4F24P-201ENST00000586049 1580 ntBASIC14.49□□□□□ -0.09
LHX2P50458 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LHX2P50458 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.49□□□□□ -0.09
LHX2P50458 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LHX2P50458 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.49□□□□□ -0.09
LHX2P50458 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.49□□□□□ -0.09
LHX2P50458 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.49□□□□□ -0.09
LHX2P50458 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.49□□□□□ -0.09
LHX2P50458 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.49□□□□□ -0.09
LHX2P50458 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.49□□□□□ -0.09
LHX2P50458 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.49□□□□□ -0.09
LHX2P50458 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.49□□□□□ -0.09
LHX2P50458 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.49□□□□□ -0.09
LHX2P50458 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.49□□□□□ -0.09
LHX2P50458 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LHX2P50458 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.49□□□□□ -0.09
LHX2P50458 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.49□□□□□ -0.09
LHX2P50458 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
LHX2P50458 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LHX2P50458 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LHX2P50458 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.48□□□□□ -0.09
LHX2P50458 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LHX2P50458 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 AC006449.6-201ENST00000612330 2296 ntBASIC14.48□□□□□ -0.09
LHX2P50458 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.48□□□□□ -0.09
LHX2P50458 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 MIR661-201ENST00000384842 89 ntBASIC14.48□□□□□ -0.09
LHX2P50458 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.48□□□□□ -0.09
LHX2P50458 SERBP1P3-201ENST00000459980 809 ntBASIC14.48□□□□□ -0.09
LHX2P50458 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.48□□□□□ -0.09
LHX2P50458 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.48□□□□□ -0.09
LHX2P50458 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.48□□□□□ -0.09
LHX2P50458 RN7SL204P-201ENST00000582831 262 ntBASIC14.48□□□□□ -0.09
LHX2P50458 LINC02084-201ENST00000606069 1096 ntBASIC14.48□□□□□ -0.09
LHX2P50458 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
LHX2P50458 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.48□□□□□ -0.09
LHX2P50458 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.48□□□□□ -0.09
LHX2P50458 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LHX2P50458 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LHX2P50458 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 AL691432.1-201ENST00000596308 1422 ntBASIC14.48□□□□□ -0.09
LHX2P50458 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.48□□□□□ -0.09
LHX2P50458 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LHX2P50458 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LHX2P50458 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LHX2P50458 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.47□□□□□ -0.09
LHX2P50458 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LHX2P50458 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms