Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.95□□□□□ -0.34
CDC34P49427 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CDC34P49427 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CDC34P49427 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 AL109954.1-202ENST00000564051 2148 ntBASIC12.94□□□□□ -0.34
CDC34P49427 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 AC020658.6-201ENST00000623564 1870 ntBASIC12.94□□□□□ -0.34
CDC34P49427 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.94□□□□□ -0.34
CDC34P49427 YBX1P2-201ENST00000489612 999 ntBASIC12.94□□□□□ -0.34
CDC34P49427 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.94□□□□□ -0.34
CDC34P49427 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.94□□□□□ -0.34
CDC34P49427 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 IGHV3-41-201ENST00000613121 348 ntBASIC12.94□□□□□ -0.34
CDC34P49427 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CDC34P49427 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC34P49427 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
CDC34P49427 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC34P49427 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CDC34P49427 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.93□□□□□ -0.34
CDC34P49427 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CDC34P49427 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.93□□□□□ -0.34
CDC34P49427 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDC34P49427 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CDC34P49427 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC34P49427 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.93□□□□□ -0.34
CDC34P49427 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 AC246785.2-201ENST00000432512 513 ntBASIC12.93□□□□□ -0.34
CDC34P49427 HOMER2P1-201ENST00000455653 964 ntBASIC12.93□□□□□ -0.34
CDC34P49427 VENTXP7-201ENST00000475503 772 ntBASIC12.93□□□□□ -0.34
CDC34P49427 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC34P49427 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC34P49427 AC090616.6-201ENST00000582640 721 ntBASIC12.93□□□□□ -0.34
CDC34P49427 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.93□□□□□ -0.34
CDC34P49427 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC34P49427 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.93□□□□□ -0.34
CDC34P49427 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDC34P49427 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 PMPCAP1-201ENST00000508114 1576 ntBASIC12.93□□□□□ -0.34
CDC34P49427 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC34P49427 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.93□□□□□ -0.34
CDC34P49427 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms