Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SART3-203ENST00000546611 1184 ntBASIC16.08■□□□□ 0.16
SLC1A6P48664 AC087388.1-201ENST00000571370 1112 ntBASIC16.08■□□□□ 0.16
SLC1A6P48664 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A6P48664 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A6P48664 AP000550.4-202ENST00000639755 178 ntBASIC16.08■□□□□ 0.16
SLC1A6P48664 AC006486.2-201ENST00000624246 2199 ntBASIC16.08■□□□□ 0.16
SLC1A6P48664 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A6P48664 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC1A6P48664 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC1A6P48664 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC1A6P48664 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SLC1A6P48664 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC1A6P48664 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC1A6P48664 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A6P48664 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A6P48664 ATP5G2P1-201ENST00000433580 426 ntBASIC16.07■□□□□ 0.16
SLC1A6P48664 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A6P48664 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A6P48664 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC1A6P48664 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A6P48664 AL355877.3-201ENST00000622820 899 ntBASIC16.07■□□□□ 0.16
SLC1A6P48664 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A6P48664 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.07■□□□□ 0.16
SLC1A6P48664 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A6P48664 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A6P48664 TMBIM7P-203ENST00000641617 1718 ntBASIC16.07■□□□□ 0.16
SLC1A6P48664 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A6P48664 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A6P48664 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A6P48664 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A6P48664 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC1A6P48664 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC1A6P48664 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC1A6P48664 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC1A6P48664 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC1A6P48664 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 FOSL1P1-201ENST00000511041 816 ntBASIC16.06■□□□□ 0.16
SLC1A6P48664 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 AL160237.2-201ENST00000556165 472 ntBASIC16.06■□□□□ 0.16
SLC1A6P48664 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A6P48664 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A6P48664 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC1A6P48664 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A6P48664 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms