Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.98■□□□□ 0.31
MMP13P45452 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.98■□□□□ 0.31
MMP13P45452 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP13P45452 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
MMP13P45452 AC006449.6-201ENST00000612330 2296 ntBASIC16.98■□□□□ 0.31
MMP13P45452 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP13P45452 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP13P45452 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
MMP13P45452 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 PMS2P7-201ENST00000506558 1336 ntBASIC16.97■□□□□ 0.31
MMP13P45452 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP13P45452 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP13P45452 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MMP13P45452 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 AL031731.1-201ENST00000642131 2094 ntBASIC16.97■□□□□ 0.31
MMP13P45452 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
MMP13P45452 PMS2P4-201ENST00000412466 1052 ntBASIC16.97■□□□□ 0.31
MMP13P45452 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP13P45452 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 PGAM5P1-201ENST00000518923 814 ntBASIC16.97■□□□□ 0.31
MMP13P45452 MIR3909-201ENST00000579518 119 ntBASIC16.97■□□□□ 0.31
MMP13P45452 AC068137.2-201ENST00000605408 478 ntBASIC16.97■□□□□ 0.31
MMP13P45452 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MMP13P45452 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP13P45452 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP13P45452 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
MMP13P45452 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP13P45452 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP13P45452 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP13P45452 AC140658.5-201ENST00000438532 169 ntBASIC16.96■□□□□ 0.31
MMP13P45452 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP13P45452 AC002347.1-201ENST00000569543 541 ntBASIC16.96■□□□□ 0.31
MMP13P45452 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 AC021097.1-201ENST00000607902 574 ntBASIC16.96■□□□□ 0.31
MMP13P45452 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP13P45452 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MMP13P45452 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms