Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MTHFRP42898 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 AC011676.5-201ENST00000624864 2660 ntBASIC17■□□□□ 0.31
MTHFRP42898 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17■□□□□ 0.31
MTHFRP42898 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17■□□□□ 0.31
MTHFRP42898 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MTHFRP42898 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 TMEM14DP-201ENST00000422205 345 ntBASIC17■□□□□ 0.31
MTHFRP42898 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17■□□□□ 0.31
MTHFRP42898 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17■□□□□ 0.31
MTHFRP42898 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17■□□□□ 0.31
MTHFRP42898 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17■□□□□ 0.31
MTHFRP42898 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17■□□□□ 0.31
MTHFRP42898 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17■□□□□ 0.31
MTHFRP42898 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17■□□□□ 0.31
MTHFRP42898 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17■□□□□ 0.31
MTHFRP42898 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17■□□□□ 0.31
MTHFRP42898 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17■□□□□ 0.31
MTHFRP42898 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MTHFRP42898 AL606495.2-201ENST00000605867 535 ntBASIC17■□□□□ 0.31
MTHFRP42898 LINC02012-201ENST00000608206 1725 ntBASIC17■□□□□ 0.31
MTHFRP42898 AC020765.3-201ENST00000613051 740 ntBASIC17■□□□□ 0.31
MTHFRP42898 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
MTHFRP42898 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17■□□□□ 0.31
MTHFRP42898 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17■□□□□ 0.31
MTHFRP42898 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
MTHFRP42898 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.99■□□□□ 0.31
MTHFRP42898 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 AC245100.3-201ENST00000441281 285 ntBASIC16.99■□□□□ 0.31
MTHFRP42898 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.99■□□□□ 0.31
MTHFRP42898 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.99■□□□□ 0.31
MTHFRP42898 AL589987.1-201ENST00000453380 819 ntBASIC16.99■□□□□ 0.31
MTHFRP42898 AL139010.1-201ENST00000454878 894 ntBASIC16.99■□□□□ 0.31
MTHFRP42898 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.99■□□□□ 0.31
MTHFRP42898 AC119751.2-201ENST00000504529 210 ntBASIC16.99■□□□□ 0.31
MTHFRP42898 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.99■□□□□ 0.31
MTHFRP42898 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.99■□□□□ 0.31
MTHFRP42898 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.99■□□□□ 0.31
MTHFRP42898 AC092337.1-201ENST00000568699 1129 ntBASIC16.99■□□□□ 0.31
MTHFRP42898 MIR4525-201ENST00000580000 75 ntBASIC16.99■□□□□ 0.31
MTHFRP42898 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
MTHFRP42898 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 WFDC1-204ENST00000613603 549 ntBASIC16.99■□□□□ 0.31
MTHFRP42898 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.99■□□□□ 0.31
MTHFRP42898 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.99■□□□□ 0.31
MTHFRP42898 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MTHFRP42898 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MTHFRP42898 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MTHFRP42898 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
MTHFRP42898 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms