Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL15A1P39059 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
COL15A1P39059 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.42■□□□□ 0.86
COL15A1P39059 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL15A1P39059 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.42■□□□□ 0.86
COL15A1P39059 AC036164.1-201ENST00000570544 333 ntBASIC20.42■□□□□ 0.86
COL15A1P39059 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.42■□□□□ 0.86
COL15A1P39059 AL606495.2-201ENST00000605867 535 ntBASIC20.42■□□□□ 0.86
COL15A1P39059 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL15A1P39059 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
COL15A1P39059 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.42■□□□□ 0.86
COL15A1P39059 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL15A1P39059 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL15A1P39059 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL15A1P39059 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.42■□□□□ 0.86
COL15A1P39059 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.41■□□□□ 0.86
COL15A1P39059 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.41■□□□□ 0.86
COL15A1P39059 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.41■□□□□ 0.86
COL15A1P39059 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
COL15A1P39059 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
COL15A1P39059 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 FLJ38576-201ENST00000623820 2459 ntBASIC20.41■□□□□ 0.86
COL15A1P39059 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.41■□□□□ 0.86
COL15A1P39059 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.41■□□□□ 0.86
COL15A1P39059 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
COL15A1P39059 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.41■□□□□ 0.86
COL15A1P39059 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COL15A1P39059 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.41■□□□□ 0.86
COL15A1P39059 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.41■□□□□ 0.86
COL15A1P39059 ME2P1-201ENST00000426028 1970 ntBASIC20.41■□□□□ 0.86
COL15A1P39059 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.41■□□□□ 0.86
COL15A1P39059 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL15A1P39059 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.4■□□□□ 0.86
COL15A1P39059 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
COL15A1P39059 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.4■□□□□ 0.86
COL15A1P39059 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
COL15A1P39059 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 AZGP1P1-201ENST00000411909 902 ntBASIC20.4■□□□□ 0.86
COL15A1P39059 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 RN7SL399P-201ENST00000471648 279 ntBASIC20.4■□□□□ 0.86
COL15A1P39059 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.4■□□□□ 0.86
COL15A1P39059 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COL15A1P39059 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 MIR5189-201ENST00000577370 114 ntBASIC20.4■□□□□ 0.86
COL15A1P39059 AC233724.13-201ENST00000598383 410 ntBASIC20.4■□□□□ 0.86
COL15A1P39059 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
COL15A1P39059 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.4■□□□□ 0.86
COL15A1P39059 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.4■□□□□ 0.86
COL15A1P39059 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 AC011676.5-201ENST00000624864 2660 ntBASIC20.4■□□□□ 0.86
COL15A1P39059 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL15A1P39059 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.4■□□□□ 0.86
COL15A1P39059 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
COL15A1P39059 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
COL15A1P39059 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL15A1P39059 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL15A1P39059 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.39■□□□□ 0.85
COL15A1P39059 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.39■□□□□ 0.85
COL15A1P39059 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 AL442647.2-201ENST00000429864 857 ntBASIC20.39■□□□□ 0.85
COL15A1P39059 KRT43P-201ENST00000434019 910 ntBASIC20.39■□□□□ 0.85
COL15A1P39059 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.39■□□□□ 0.85
COL15A1P39059 RPL13P2-201ENST00000440687 659 ntBASIC20.39■□□□□ 0.85
COL15A1P39059 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.39■□□□□ 0.85
COL15A1P39059 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
COL15A1P39059 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.39■□□□□ 0.85
COL15A1P39059 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COL15A1P39059 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL15A1P39059 BTNL10-201ENST00000595971 695 ntBASIC20.39■□□□□ 0.85
COL15A1P39059 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms