Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC4P35249 AC007613.1-201ENST00000572811 2597 ntBASIC20.27■□□□□ 0.83
RFC4P35249 AL691432.1-201ENST00000596308 1422 ntBASIC20.27■□□□□ 0.83
RFC4P35249 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RFC4P35249 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RFC4P35249 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFC4P35249 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.26■□□□□ 0.83
RFC4P35249 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.26■□□□□ 0.83
RFC4P35249 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.26■□□□□ 0.83
RFC4P35249 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 SOCS2P1-201ENST00000417727 557 ntBASIC20.26■□□□□ 0.83
RFC4P35249 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
RFC4P35249 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.26■□□□□ 0.83
RFC4P35249 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.26■□□□□ 0.83
RFC4P35249 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
RFC4P35249 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.26■□□□□ 0.83
RFC4P35249 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RFC4P35249 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.26■□□□□ 0.83
RFC4P35249 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RFC4P35249 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RFC4P35249 PP12613-201ENST00000424958 2230 ntBASIC20.26■□□□□ 0.83
RFC4P35249 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.26■□□□□ 0.83
RFC4P35249 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.26■□□□□ 0.83
RFC4P35249 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC4P35249 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RFC4P35249 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC4P35249 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC4P35249 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC4P35249 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC4P35249 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.25■□□□□ 0.83
RFC4P35249 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.25■□□□□ 0.83
RFC4P35249 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.25■□□□□ 0.83
RFC4P35249 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC4P35249 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.25■□□□□ 0.83
RFC4P35249 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC4P35249 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.25■□□□□ 0.83
RFC4P35249 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC4P35249 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC4P35249 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.25■□□□□ 0.83
RFC4P35249 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC4P35249 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.25■□□□□ 0.83
RFC4P35249 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.25■□□□□ 0.83
RFC4P35249 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
RFC4P35249 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFC4P35249 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.24■□□□□ 0.83
RFC4P35249 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.24■□□□□ 0.83
RFC4P35249 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 INTS4P2-202ENST00000614726 2019 ntBASIC20.24■□□□□ 0.83
RFC4P35249 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 YBX1P6-201ENST00000442962 1002 ntBASIC20.24■□□□□ 0.83
RFC4P35249 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.24■□□□□ 0.83
RFC4P35249 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.24■□□□□ 0.83
RFC4P35249 AC124283.3-201ENST00000570869 594 ntBASIC20.24■□□□□ 0.83
RFC4P35249 AC010328.2-201ENST00000597698 1111 ntBASIC20.24■□□□□ 0.83
RFC4P35249 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.24■□□□□ 0.83
RFC4P35249 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.24■□□□□ 0.83
RFC4P35249 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.24■□□□□ 0.83
RFC4P35249 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.24■□□□□ 0.83
RFC4P35249 KRT8P37-201ENST00000451609 1420 ntBASIC20.24■□□□□ 0.83
RFC4P35249 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RFC4P35249 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFC4P35249 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.24■□□□□ 0.83
RFC4P35249 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.23■□□□□ 0.83
RFC4P35249 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.23■□□□□ 0.83
RFC4P35249 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RFC4P35249 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.23■□□□□ 0.83
RFC4P35249 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFC4P35249 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFC4P35249 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms