Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
USP6P35125 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.67■■□□□ 1.06
USP6P35125 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP6P35125 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
USP6P35125 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6P35125 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.66■■□□□ 1.06
USP6P35125 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
USP6P35125 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
USP6P35125 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
USP6P35125 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.66■■□□□ 1.06
USP6P35125 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6P35125 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.66■■□□□ 1.06
USP6P35125 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6P35125 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 REXO1L1P-202ENST00000608646 1974 ntBASIC21.66■■□□□ 1.06
USP6P35125 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6P35125 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.66■■□□□ 1.06
USP6P35125 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
USP6P35125 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.66■■□□□ 1.06
USP6P35125 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.66■■□□□ 1.06
USP6P35125 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
USP6P35125 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP6P35125 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6P35125 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6P35125 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.65■■□□□ 1.06
USP6P35125 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.65■■□□□ 1.06
USP6P35125 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.65■■□□□ 1.06
USP6P35125 PHKG1P2-201ENST00000457537 863 ntBASIC21.65■■□□□ 1.06
USP6P35125 AP001889.1-201ENST00000525414 633 ntBASIC21.65■■□□□ 1.06
USP6P35125 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.65■■□□□ 1.06
USP6P35125 CLUHP6-201ENST00000580789 941 ntBASIC21.65■■□□□ 1.06
USP6P35125 AL022328.1-201ENST00000610050 478 ntBASIC21.65■■□□□ 1.06
USP6P35125 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6P35125 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC21.65■■□□□ 1.06
USP6P35125 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.65■■□□□ 1.06
USP6P35125 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
USP6P35125 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6P35125 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6P35125 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.65■■□□□ 1.06
USP6P35125 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.65■■□□□ 1.06
USP6P35125 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.65■■□□□ 1.06
USP6P35125 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
USP6P35125 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.65■■□□□ 1.06
USP6P35125 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
USP6P35125 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP6P35125 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6P35125 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
USP6P35125 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6P35125 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6P35125 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
USP6P35125 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.64■■□□□ 1.06
USP6P35125 HAUS4P1-201ENST00000406739 1145 ntBASIC21.64■■□□□ 1.06
USP6P35125 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.64■■□□□ 1.06
USP6P35125 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.64■■□□□ 1.06
USP6P35125 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6P35125 VDAC1P7-201ENST00000462417 847 ntBASIC21.64■■□□□ 1.06
USP6P35125 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.64■■□□□ 1.06
USP6P35125 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.64■■□□□ 1.06
USP6P35125 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.64■■□□□ 1.06
USP6P35125 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.64■■□□□ 1.06
USP6P35125 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21.64■■□□□ 1.06
USP6P35125 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.64■■□□□ 1.06
USP6P35125 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6P35125 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP6P35125 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.64■■□□□ 1.06
USP6P35125 ALOX12P2-203ENST00000570921 1945 ntBASIC21.64■■□□□ 1.06
USP6P35125 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6P35125 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6P35125 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
USP6P35125 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.64■■□□□ 1.05
USP6P35125 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP6P35125 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6P35125 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6P35125 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.64■■□□□ 1.05
USP6P35125 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6P35125 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
USP6P35125 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6P35125 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC21.63■■□□□ 1.05
USP6P35125 AC134915.1-201ENST00000426461 574 ntBASIC21.63■■□□□ 1.05
USP6P35125 KLF2P4-201ENST00000451959 1225 ntBASIC21.63■■□□□ 1.05
USP6P35125 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
USP6P35125 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
USP6P35125 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms