Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.37□□□□□ -0.11
UBCP0CG48 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
UBCP0CG48 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBCP0CG48 AP005117.1-202ENST00000581724 1908 ntBASIC14.37□□□□□ -0.11
UBCP0CG48 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.37□□□□□ -0.11
UBCP0CG48 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UBCP0CG48 AL365209.1-201ENST00000624418 6473 ntBASIC14.36□□□□□ -0.11
UBCP0CG48 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.36□□□□□ -0.11
UBCP0CG48 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.36□□□□□ -0.11
UBCP0CG48 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.36□□□□□ -0.11
UBCP0CG48 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.36□□□□□ -0.11
UBCP0CG48 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.36□□□□□ -0.11
UBCP0CG48 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.36□□□□□ -0.11
UBCP0CG48 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
UBCP0CG48 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.36□□□□□ -0.11
UBCP0CG48 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.36□□□□□ -0.11
UBCP0CG48 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.36□□□□□ -0.11
UBCP0CG48 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.36□□□□□ -0.11
UBCP0CG48 IGHV3-65-201ENST00000523210 341 ntBASIC14.36□□□□□ -0.11
UBCP0CG48 AF238378.1-201ENST00000526806 358 ntBASIC14.36□□□□□ -0.11
UBCP0CG48 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.36□□□□□ -0.11
UBCP0CG48 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.36□□□□□ -0.11
UBCP0CG48 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.36□□□□□ -0.11
UBCP0CG48 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.36□□□□□ -0.11
UBCP0CG48 AC021097.1-201ENST00000607902 574 ntBASIC14.36□□□□□ -0.11
UBCP0CG48 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
UBCP0CG48 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
UBCP0CG48 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.36□□□□□ -0.11
UBCP0CG48 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBCP0CG48 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.36□□□□□ -0.11
UBCP0CG48 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.36□□□□□ -0.11
UBCP0CG48 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBCP0CG48 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 U82695.1-201ENST00000635752 1889 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UBCP0CG48 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.35□□□□□ -0.11
UBCP0CG48 AC069224.1-201ENST00000566372 1715 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBCP0CG48 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
UBCP0CG48 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.35□□□□□ -0.11
UBCP0CG48 MRPL20P1-201ENST00000400819 433 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 RPS2P1-201ENST00000434010 821 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 DUSP5P1-201ENST00000441325 1139 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 AL160237.2-201ENST00000556165 472 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
UBCP0CG48 AC008735.5-201ENST00000623544 497 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.35□□□□□ -0.11
UBCP0CG48 AC112504.1-201ENST00000623415 1841 ntBASIC14.35□□□□□ -0.11
UBCP0CG48 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.35□□□□□ -0.11
UBCP0CG48 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.35□□□□□ -0.11
UBCP0CG48 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBCP0CG48 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBCP0CG48 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms