Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TOP3BO95985 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP3BO95985 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TOP3BO95985 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 AC051619.7-201ENST00000568314 623 ntBASIC16.76■□□□□ 0.27
TOP3BO95985 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.76■□□□□ 0.27
TOP3BO95985 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP3BO95985 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TOP3BO95985 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TOP3BO95985 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP3BO95985 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP3BO95985 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 AC105917.1-201ENST00000506637 2539 ntBASIC16.75■□□□□ 0.27
TOP3BO95985 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.75■□□□□ 0.27
TOP3BO95985 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 AL590787.1-201ENST00000568856 1315 ntBASIC16.75■□□□□ 0.27
TOP3BO95985 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.75■□□□□ 0.27
TOP3BO95985 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.75■□□□□ 0.27
TOP3BO95985 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 AC245100.3-201ENST00000441281 285 ntBASIC16.75■□□□□ 0.27
TOP3BO95985 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.75■□□□□ 0.27
TOP3BO95985 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.75■□□□□ 0.27
TOP3BO95985 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.75■□□□□ 0.27
TOP3BO95985 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TOP3BO95985 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
TOP3BO95985 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP3BO95985 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TOP3BO95985 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP3BO95985 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP3BO95985 SNX33P1-201ENST00000592116 1762 ntBASIC16.74■□□□□ 0.27
TOP3BO95985 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP3BO95985 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TOP3BO95985 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.74■□□□□ 0.27
TOP3BO95985 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP3BO95985 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP3BO95985 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 KRT8P49-201ENST00000604166 1432 ntBASIC16.74■□□□□ 0.27
TOP3BO95985 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TOP3BO95985 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP3BO95985 ADH5P3-201ENST00000433842 1137 ntBASIC16.74■□□□□ 0.27
TOP3BO95985 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.74■□□□□ 0.27
TOP3BO95985 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.74■□□□□ 0.27
TOP3BO95985 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP3BO95985 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP3BO95985 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.74■□□□□ 0.27
TOP3BO95985 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP3BO95985 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP3BO95985 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP3BO95985 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP3BO95985 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP3BO95985 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms