Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CDKL5O76039 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CDKL5O76039 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL5O76039 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL5O76039 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL5O76039 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CDKL5O76039 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL5O76039 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDKL5O76039 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL5O76039 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 HAUS4P1-201ENST00000406739 1145 ntBASIC18.95■□□□□ 0.62
CDKL5O76039 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL5O76039 DNAJB3-201ENST00000446806 729 ntBASIC18.95■□□□□ 0.62
CDKL5O76039 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL5O76039 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL5O76039 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL5O76039 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.95■□□□□ 0.62
CDKL5O76039 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL5O76039 AC027307.2-201ENST00000591252 911 ntBASIC18.95■□□□□ 0.62
CDKL5O76039 MIR4321-201ENST00000592276 80 ntBASIC18.95■□□□□ 0.62
CDKL5O76039 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL5O76039 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDKL5O76039 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.95■□□□□ 0.62
CDKL5O76039 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL5O76039 CDC14C-201ENST00000428251 1719 ntBASIC18.94■□□□□ 0.62
CDKL5O76039 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 LINC02447-202ENST00000501888 2146 ntBASIC18.94■□□□□ 0.62
CDKL5O76039 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDKL5O76039 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL5O76039 HTR5BP-201ENST00000430851 1154 ntBASIC18.94■□□□□ 0.62
CDKL5O76039 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDKL5O76039 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.94■□□□□ 0.62
CDKL5O76039 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL5O76039 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.94■□□□□ 0.62
CDKL5O76039 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
CDKL5O76039 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL5O76039 SPTSSB-204ENST00000617024 1292 ntBASIC18.94■□□□□ 0.62
CDKL5O76039 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
CDKL5O76039 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL5O76039 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL5O76039 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL5O76039 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
CDKL5O76039 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL5O76039 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL5O76039 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CDKL5O76039 AC069224.1-201ENST00000566372 1715 ntBASIC18.94■□□□□ 0.62
CDKL5O76039 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL5O76039 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDKL5O76039 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.93■□□□□ 0.62
CDKL5O76039 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.93■□□□□ 0.62
CDKL5O76039 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDKL5O76039 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDKL5O76039 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.93■□□□□ 0.62
CDKL5O76039 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CDKL5O76039 AP000347.1-202ENST00000435868 847 ntBASIC18.93■□□□□ 0.62
CDKL5O76039 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.93■□□□□ 0.62
CDKL5O76039 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.93■□□□□ 0.62
CDKL5O76039 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.93■□□□□ 0.62
CDKL5O76039 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms