Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CPNE3O75131 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE3O75131 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE3O75131 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CPNE3O75131 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE3O75131 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE3O75131 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 AP002490.2-201ENST00000524791 560 ntBASIC15.72■□□□□ 0.11
CPNE3O75131 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.72■□□□□ 0.11
CPNE3O75131 AL138918.1-201ENST00000568306 659 ntBASIC15.72■□□□□ 0.11
CPNE3O75131 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE3O75131 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE3O75131 AC073389.1-201ENST00000595595 795 ntBASIC15.72■□□□□ 0.11
CPNE3O75131 AJ011932.1-201ENST00000621707 465 ntBASIC15.72■□□□□ 0.11
CPNE3O75131 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CPNE3O75131 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CPNE3O75131 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE3O75131 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE3O75131 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE3O75131 AC105020.1-201ENST00000435356 2205 ntBASIC15.71■□□□□ 0.11
CPNE3O75131 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE3O75131 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE3O75131 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CPNE3O75131 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE3O75131 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPNE3O75131 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE3O75131 AC142381.1-201ENST00000426099 345 ntBASIC15.71■□□□□ 0.11
CPNE3O75131 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE3O75131 INGX-202ENST00000489074 768 ntBASIC15.71■□□□□ 0.11
CPNE3O75131 PRYP6-201ENST00000514804 343 ntBASIC15.71■□□□□ 0.11
CPNE3O75131 IGHV3-42-201ENST00000520410 361 ntBASIC15.71■□□□□ 0.11
CPNE3O75131 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE3O75131 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE3O75131 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE3O75131 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE3O75131 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE3O75131 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.71■□□□□ 0.11
CPNE3O75131 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE3O75131 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CPNE3O75131 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CPNE3O75131 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE3O75131 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE3O75131 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.71■□□□□ 0.1
CPNE3O75131 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE3O75131 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.71■□□□□ 0.1
CPNE3O75131 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE3O75131 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.71■□□□□ 0.1
CPNE3O75131 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE3O75131 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE3O75131 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPNE3O75131 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE3O75131 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE3O75131 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE3O75131 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms