Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NDUFA1O15239 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 AL671710.1-201ENST00000610245 2349 ntBASIC11.21□□□□□ -0.61
NDUFA1O15239 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 REXO1L8P-201ENST00000604378 1897 ntBASIC11.21□□□□□ -0.61
NDUFA1O15239 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.21□□□□□ -0.61
NDUFA1O15239 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
NDUFA1O15239 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
NDUFA1O15239 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.21□□□□□ -0.61
NDUFA1O15239 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
NDUFA1O15239 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
NDUFA1O15239 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
NDUFA1O15239 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.21□□□□□ -0.61
NDUFA1O15239 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
NDUFA1O15239 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
NDUFA1O15239 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
NDUFA1O15239 IGHV3-47-201ENST00000425060 335 ntBASIC11.21□□□□□ -0.61
NDUFA1O15239 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.21□□□□□ -0.61
NDUFA1O15239 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.21□□□□□ -0.61
NDUFA1O15239 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.21□□□□□ -0.61
NDUFA1O15239 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.21□□□□□ -0.61
NDUFA1O15239 AC069148.1-201ENST00000608741 768 ntBASIC11.21□□□□□ -0.61
NDUFA1O15239 AP000867.4-201ENST00000641616 219 ntBASIC11.21□□□□□ -0.61
NDUFA1O15239 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
NDUFA1O15239 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
NDUFA1O15239 AC006486.2-201ENST00000624246 2199 ntBASIC11.21□□□□□ -0.62
NDUFA1O15239 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
NDUFA1O15239 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
NDUFA1O15239 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
NDUFA1O15239 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
NDUFA1O15239 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
NDUFA1O15239 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.21□□□□□ -0.62
NDUFA1O15239 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.21□□□□□ -0.62
NDUFA1O15239 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.21□□□□□ -0.62
NDUFA1O15239 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.21□□□□□ -0.62
NDUFA1O15239 TMBIM7P-203ENST00000641617 1718 ntBASIC11.21□□□□□ -0.62
NDUFA1O15239 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
NDUFA1O15239 AP002414.2-201ENST00000591780 3365 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 AC148477.5-201ENST00000625164 1645 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.2□□□□□ -0.62
NDUFA1O15239 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
NDUFA1O15239 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.2□□□□□ -0.62
NDUFA1O15239 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
NDUFA1O15239 SBF1P1-201ENST00000444527 5631 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 AL031731.1-201ENST00000642131 2094 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
NDUFA1O15239 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NDUFA1O15239 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
NDUFA1O15239 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.2□□□□□ -0.62
NDUFA1O15239 NUS1P2-201ENST00000417358 873 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 LINC00982-205ENST00000420957 435 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 ABCD1P5-201ENST00000445663 754 ntBASIC11.2□□□□□ -0.62
NDUFA1O15239 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.2□□□□□ -0.62
NDUFA1O15239 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms