Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CEP290O15078 AC008132.1-202ENST00000342005 1389 ntBASIC17.34■□□□□ 0.37
CEP290O15078 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CEP290O15078 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.33■□□□□ 0.37
CEP290O15078 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.33■□□□□ 0.37
CEP290O15078 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.33■□□□□ 0.37
CEP290O15078 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.33■□□□□ 0.37
CEP290O15078 EEF1DP4-201ENST00000446006 880 ntBASIC17.33■□□□□ 0.37
CEP290O15078 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CEP290O15078 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.33■□□□□ 0.37
CEP290O15078 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.33■□□□□ 0.37
CEP290O15078 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.33■□□□□ 0.37
CEP290O15078 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.33■□□□□ 0.37
CEP290O15078 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.33■□□□□ 0.37
CEP290O15078 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CEP290O15078 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CEP290O15078 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CEP290O15078 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.33■□□□□ 0.37
CEP290O15078 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CEP290O15078 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.33■□□□□ 0.36
CEP290O15078 AC007274.2-201ENST00000421675 662 ntBASIC17.33■□□□□ 0.36
CEP290O15078 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.33■□□□□ 0.36
CEP290O15078 AL596276.2-201ENST00000447525 331 ntBASIC17.33■□□□□ 0.36
CEP290O15078 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.33■□□□□ 0.36
CEP290O15078 RN7SL774P-201ENST00000577467 290 ntBASIC17.33■□□□□ 0.36
CEP290O15078 AC073352.2-201ENST00000609385 439 ntBASIC17.33■□□□□ 0.36
CEP290O15078 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.33■□□□□ 0.36
CEP290O15078 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.33■□□□□ 0.36
CEP290O15078 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.33■□□□□ 0.36
CEP290O15078 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CEP290O15078 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AL139008.1-201ENST00000437894 228 ntBASIC17.32■□□□□ 0.36
CEP290O15078 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.32■□□□□ 0.36
CEP290O15078 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.32■□□□□ 0.36
CEP290O15078 RN7SL8P-201ENST00000461771 266 ntBASIC17.32■□□□□ 0.36
CEP290O15078 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AC023310.1-201ENST00000554836 735 ntBASIC17.32■□□□□ 0.36
CEP290O15078 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.32■□□□□ 0.36
CEP290O15078 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.32■□□□□ 0.36
CEP290O15078 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.32■□□□□ 0.36
CEP290O15078 AC006277.1-201ENST00000624348 1610 ntBASIC17.32■□□□□ 0.36
CEP290O15078 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.32■□□□□ 0.36
CEP290O15078 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CEP290O15078 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CEP290O15078 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AC133963.1-201ENST00000504166 1679 ntBASIC17.32■□□□□ 0.36
CEP290O15078 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.32■□□□□ 0.36
CEP290O15078 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.32■□□□□ 0.36
CEP290O15078 FAM197Y7-201ENST00000432892 766 ntBASIC17.32■□□□□ 0.36
CEP290O15078 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.32■□□□□ 0.36
CEP290O15078 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.32■□□□□ 0.36
CEP290O15078 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.32■□□□□ 0.36
CEP290O15078 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AC093503.3-201ENST00000624917 2352 ntBASIC17.32■□□□□ 0.36
CEP290O15078 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.32■□□□□ 0.36
CEP290O15078 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEP290O15078 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.32■□□□□ 0.36
CEP290O15078 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CEP290O15078 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CEP290O15078 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.31■□□□□ 0.36
CEP290O15078 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.31■□□□□ 0.36
CEP290O15078 AC007663.3-201ENST00000609632 465 ntBASIC17.31■□□□□ 0.36
CEP290O15078 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CEP290O15078 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CEP290O15078 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CEP290O15078 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.31■□□□□ 0.36
CEP290O15078 DRD5P1-201ENST00000456605 1438 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms