Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 INGX-202ENST00000489074 768 ntBASIC18.31■□□□□ 0.52
DDX39AO00148 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX39AO00148 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX39AO00148 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 AL096865.1-201ENST00000606796 927 ntBASIC18.31■□□□□ 0.52
DDX39AO00148 AL589739.1-201ENST00000607720 493 ntBASIC18.31■□□□□ 0.52
DDX39AO00148 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.31■□□□□ 0.52
DDX39AO00148 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX39AO00148 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX39AO00148 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 ME2P1-201ENST00000426028 1970 ntBASIC18.31■□□□□ 0.52
DDX39AO00148 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.3■□□□□ 0.52
DDX39AO00148 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 PRORSD1P-202ENST00000563365 2154 ntBASIC18.3■□□□□ 0.52
DDX39AO00148 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 UGT1A2P-201ENST00000454886 866 ntBASIC18.3■□□□□ 0.52
DDX39AO00148 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 POU5F1P6-201ENST00000466990 990 ntBASIC18.3■□□□□ 0.52
DDX39AO00148 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX39AO00148 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX39AO00148 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX39AO00148 AC092364.2-202ENST00000597012 1073 ntBASIC18.3■□□□□ 0.52
DDX39AO00148 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.3■□□□□ 0.52
DDX39AO00148 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
DDX39AO00148 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DDX39AO00148 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.3■□□□□ 0.52
DDX39AO00148 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DDX39AO00148 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DDX39AO00148 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX39AO00148 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX39AO00148 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.29■□□□□ 0.52
DDX39AO00148 AL512638.1-201ENST00000457493 794 ntBASIC18.29■□□□□ 0.52
DDX39AO00148 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.29■□□□□ 0.52
DDX39AO00148 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.29■□□□□ 0.52
DDX39AO00148 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.29■□□□□ 0.52
DDX39AO00148 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.29■□□□□ 0.52
DDX39AO00148 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.29■□□□□ 0.52
DDX39AO00148 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DDX39AO00148 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX39AO00148 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.29■□□□□ 0.52
DDX39AO00148 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 AC100757.3-201ENST00000622361 1406 ntBASIC18.29■□□□□ 0.52
DDX39AO00148 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.29■□□□□ 0.52
DDX39AO00148 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DDX39AO00148 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms