Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 AC233724.13-201ENST00000598383 410 ntBASIC20.2■□□□□ 0.82
LAMB4A4D0S4 AL033527.5-201ENST00000641382 801 ntBASIC20.2■□□□□ 0.82
LAMB4A4D0S4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB4A4D0S4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 VDAC1P7-201ENST00000462417 847 ntBASIC20.19■□□□□ 0.82
LAMB4A4D0S4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB4A4D0S4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CROCCP4-201ENST00000457096 498 ntBASIC20.18■□□□□ 0.82
LAMB4A4D0S4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 AC106760.1-201ENST00000508690 800 ntBASIC20.18■□□□□ 0.82
LAMB4A4D0S4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 AC005252.2-201ENST00000624630 1141 ntBASIC20.18■□□□□ 0.82
LAMB4A4D0S4 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.18■□□□□ 0.82
LAMB4A4D0S4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 AL512343.1-201ENST00000605837 169 ntBASIC20.18■□□□□ 0.82
LAMB4A4D0S4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB4A4D0S4 KRT8P22-201ENST00000562317 1415 ntBASIC20.17■□□□□ 0.82
LAMB4A4D0S4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 RPS2P32-201ENST00000439199 892 ntBASIC20.17■□□□□ 0.82
LAMB4A4D0S4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 AP005482.1-201ENST00000563722 1273 ntBASIC20.17■□□□□ 0.82
LAMB4A4D0S4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.17■□□□□ 0.82
LAMB4A4D0S4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms