Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PFN1P12-201ENST00000455938 534 ntBASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 ZNF767P-206ENST00000513792 565 ntBASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC009486.1-201ENST00000569860 813 ntBASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 AL592424.1-201ENST00000563624 1536 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 HTR7P1-202ENST00000624664 4411 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC026954.1-201ENST00000429771 1293 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC012441.1-201ENST00000446669 685 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 VDAC1P7-201ENST00000462417 847 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 MIR3615-201ENST00000581999 87 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC244669.2-201ENST00000612320 853 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 AL139099.5-201ENST00000635274 300 ntBASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC102724428A0A0B4J2F2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC016694.1-201ENST00000434179 700 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 YBX1P6-201ENST00000442962 1002 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC106760.1-201ENST00000508690 800 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC010328.2-201ENST00000597698 1111 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC009542.2-202ENST00000619004 1067 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC005252.2-201ENST00000624630 1141 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AC134312.5-201ENST00000568031 1313 ntBASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
LOC102724428A0A0B4J2F2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC102724428A0A0B4J2F2 MIR1247-201ENST00000408206 136 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms