Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AL161772.1-201ENST00000610494 4412 ntBASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AC106795.1-205ENST00000512851 1056 ntBASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AC139887.3-201ENST00000568585 713 ntBASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AL732292.2-201ENST00000609649 430 ntBASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 NPAP1P7-201ENST00000613027 823 ntBASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 AC016027.1-202ENST00000607927 1699 ntBASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AL353732.1-201ENST00000569618 1459 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 MIR648-201ENST00000385046 94 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AC087641.1-201ENST00000557561 1021 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AC087388.1-201ENST00000571370 1112 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 MTDHP3-201ENST00000594186 672 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AC004706.3-202ENST00000621574 984 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AL139288.1-201ENST00000623748 933 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 AF228730.7-201ENST00000641842 219 ntBASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV5A0A0B4J249 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms