Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 ZNF259P1-201ENST00000407656 1365 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV1A0A0A0MS02 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV1A0A0A0MS02 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV1A0A0A0MS02 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV1A0A0A0MS02 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV1A0A0A0MS02 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV1A0A0A0MS02 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRGV1A0A0A0MS02 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 IL9RP2-201ENST00000423948 1312 ntBASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 BCAR1-209ENST00000546196 1340 ntBASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 POU5F1P6-201ENST00000466990 990 ntBASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 AC064836.3-201ENST00000607928 673 ntBASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 AC120114.3-201ENST00000611923 658 ntBASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV1A0A0A0MS02 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 SBF1P1-201ENST00000444527 5631 ntBASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV1A0A0A0MS02 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms