Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.89■■□□□ 1.1
PHF8Q9UPP1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PHF8Q9UPP1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.89■■□□□ 1.1
PHF8Q9UPP1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PHF8Q9UPP1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.89■■□□□ 1.1
PHF8Q9UPP1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AC004945.1-201ENST00000416738 983 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AC026954.1-201ENST00000429771 1293 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 GOLGA2P4-201ENST00000441462 777 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 YBX1P6-201ENST00000442962 1002 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AC012441.1-201ENST00000446669 685 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AC245100.5-201ENST00000452108 331 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 RPL13AP20-201ENST00000459725 609 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AC010328.2-201ENST00000597698 1111 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 BNIP3P1-202ENST00000550043 1585 ntBASIC21.89■■□□□ 1.09
PHF8Q9UPP1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHF8Q9UPP1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.88■■□□□ 1.09
PHF8Q9UPP1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 GPAA1P2-201ENST00000417923 928 ntBASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AC016694.1-201ENST00000434179 700 ntBASIC21.88■■□□□ 1.09
PHF8Q9UPP1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 VDAC1P7-201ENST00000462417 847 ntBASIC21.88■■□□□ 1.09
PHF8Q9UPP1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AC106760.1-201ENST00000508690 800 ntBASIC21.88■■□□□ 1.09
PHF8Q9UPP1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AC005252.2-201ENST00000624630 1141 ntBASIC21.88■■□□□ 1.09
PHF8Q9UPP1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHF8Q9UPP1 AC009053.2-201ENST00000563701 2365 ntBASIC21.88■■□□□ 1.09
PHF8Q9UPP1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 AC134312.5-201ENST00000568031 1313 ntBASIC21.87■■□□□ 1.09
PHF8Q9UPP1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 AC243960.2-201ENST00000600996 747 ntBASIC21.87■■□□□ 1.09
PHF8Q9UPP1 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PHF8Q9UPP1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.86■■□□□ 1.09
PHF8Q9UPP1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms