Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AC010654.1-201ENST00000615722 808 ntBASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NIPSNAP3AQ9UFN0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC097376.2-205ENST00000610159 5334 ntBASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC126177.1-201ENST00000547829 2218 ntBASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 ELK2BP-201ENST00000415014 1224 ntBASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 SART3-203ENST00000546611 1184 ntBASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 AL355877.3-201ENST00000622820 899 ntBASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 AL805961.1-202ENST00000641562 540 ntBASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.66■□□□□ 0.1
NIPSNAP3AQ9UFN0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC107918.2-201ENST00000530817 355 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC005412.3-201ENST00000580309 715 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC008608.2-201ENST00000606089 416 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC091076.1-201ENST00000610741 619 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC112504.1-201ENST00000623415 1841 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC006504.4-201ENST00000592118 1568 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AP003680.1-201ENST00000598970 3660 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 OR2I1P-209ENST00000641730 5365 ntBASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NIPSNAP3AQ9UFN0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
NIPSNAP3AQ9UFN0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms